HL_8BR8_095
3D structure
- PDB id
- 8BR8 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Giardia ribosome in POST-T state (A1)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.35 Å
Loop
- Sequence
- GACUCAACGC
- Length
- 10 nucleotides
- Bulged bases
- 8BR8|1|St|G|940
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8BR8_095 not in the Motif Atlas
- Homologous match to HL_4V88_212
- Geometric discrepancy: 0.1708
- The information below is about HL_4V88_212
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_50779.1
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 5
Unit IDs
8BR8|1|St|G|932
8BR8|1|St|A|933
8BR8|1|St|C|934
8BR8|1|St|U|935
8BR8|1|St|C|936
8BR8|1|St|A|937
8BR8|1|St|A|938
8BR8|1|St|C|939
8BR8|1|St|G|940
8BR8|1|St|C|941
Current chains
- Chain St
- Small Subunit rRNA
Nearby chains
- Chain ST
- Ribosomal protein S16
- Chain SV
- Ribosomal protein S18
- Chain SX
- Ribosomal protein S20
- Chain Sh
- Ribosomal protein S29A
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