HL_8ETI_013
3D structure
- PDB id
- 8ETI (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Fkbp39 associated 60S nascent ribosome State 1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.7 Å
Loop
- Sequence
- GUGAUGAAAAC
- Length
- 11 nucleotides
- Bulged bases
- 8ETI|1|1|G|716, 8ETI|1|1|A|718
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8ETI_013 not in the Motif Atlas
- Homologous match to HL_8C3A_015
- Geometric discrepancy: 0.1206
- The information below is about HL_8C3A_015
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_53971.1
- Basepair signature
- cWW-F-F-F-F-F
- Number of instances in this motif group
- 4
Unit IDs
8ETI|1|1|G|711
8ETI|1|1|U|712
8ETI|1|1|G|713
8ETI|1|1|A|714
8ETI|1|1|U|715
8ETI|1|1|G|716
8ETI|1|1|A|717
8ETI|1|1|A|718
8ETI|1|1|A|719
8ETI|1|1|A|720
8ETI|1|1|C|721
Current chains
- Chain 1
- RNA (1564-MER)
Nearby chains
- Chain 2
- 5.8S ribosomal RNA; 5.8S rRNA
- Chain C
- 60S ribosomal protein L4-B
- Chain L
- 60S ribosomal protein L13
- Chain N
- 60S ribosomal protein L15-A
- Chain Y
- 60S ribosomal protein L26
- Chain v
- Nucleolar protein 16
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