HL_8FL9_031
3D structure
- PDB id
- 8FL9 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human nuclear pre-60S ribosomal subunit (State J3)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.75 Å
Loop
- Sequence
- UGUAACAA
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8FL9_031 not in the Motif Atlas
- Homologous match to HL_8C3A_028
- Geometric discrepancy: 0.1937
- The information below is about HL_8C3A_028
- Detailed Annotation
- GNRA wlth tandem sheared
- Broad Annotation
- No text annotation
- Motif group
- HL_27115.2
- Basepair signature
- cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 22
Unit IDs
8FL9|1|L3|U|2006
8FL9|1|L3|G|2007
8FL9|1|L3|U|2008
8FL9|1|L3|A|2009
8FL9|1|L3|A|2010
8FL9|1|L3|C|2011
8FL9|1|L3|A|2012
8FL9|1|L3|A|2013
Current chains
- Chain L3
- 28S rRNA
Nearby chains
- Chain BA
- 60S ribosomal protein L12
- Chain NF
- Ribosome biogenesis protein NSA2 homolog
- Chain SQ
- mRNA turnover protein 4 homolog
- Chain SR
- GTP-binding protein 4
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