HL_8FL9_065
3D structure
- PDB id
- 8FL9 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Human nuclear pre-60S ribosomal subunit (State J3)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.75 Å
Loop
- Sequence
- GAU(OMU)(OMG)(PSU)UCACC
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: OMU, OMG, PSU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8FL9_065 not in the Motif Atlas
- Geometric match to HL_6GSK_218
- Geometric discrepancy: 0.3577
- The information below is about HL_6GSK_218
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_14063.1
- Basepair signature
- cWW-F-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 4
Unit IDs
8FL9|1|L3|G|4495
8FL9|1|L3|A|4496
8FL9|1|L3|U|4497
8FL9|1|L3|OMU|4498
8FL9|1|L3|OMG|4499
8FL9|1|L3|PSU|4500
8FL9|1|L3|U|4501
8FL9|1|L3|C|4502
8FL9|1|L3|A|4503
8FL9|1|L3|C|4504
8FL9|1|L3|C|4505
Current chains
- Chain L3
- 28S rRNA
Nearby chains
- Chain LG
- 60S ribosomal protein L23
- Chain LN
- 60S ribosomal protein L3
- Chain SR
- GTP-binding protein 4
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