HL_8G2U_014

3D structure

PDB id

8G2U (explore in PDB, NAKB, or RNA 3D Hub)

Description

Time-resolved cryo-EM study of the 70S recycling by the HflX:control-apo-70S at 900ms

Experimental method

ELECTRON MICROSCOPY

Resolution

3 Å

Loop

Sequence

ACACGUGGUAU

Length

11 nucleotides

Bulged bases

8G2U|1|B|G|386

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8G2U_014 not in the Motif Atlas

Homologous match to HL_5J7L_145

Geometric discrepancy: 0.096

The information below is about HL_5J7L_145

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_91503.7

Basepair signature

cWW-F-F-F-F-F-F-F

Number of instances in this motif group

3

Unit IDs

8G2U|1|B|A|382
8G2U|1|B|C|383
8G2U|1|B|A|384
8G2U|1|B|C|385
8G2U|1|B|G|386
8G2U|1|B|U|387
8G2U|1|B|G|388
8G2U|1|B|G|389
8G2U|1|B|U|390
8G2U|1|B|A|391
8G2U|1|B|U|392

Current chains

Chain B

23S rRNA

Nearby chains

Chain X

50S ribosomal protein L28