HL_8G61_034

3D structure

PDB id

8G61 (explore in PDB, NAKB, or RNA 3D Hub)

Description

mRNA decoding in human is kinetically and structurally distinct from bacteria (AC state)

Experimental method

ELECTRON MICROSCOPY

Resolution

2.94 Å

Loop

Sequence

UGUAACAA

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8G61_034 not in the Motif Atlas

Homologous match to HL_8C3A_028

Geometric discrepancy: 0.2398

The information below is about HL_8C3A_028

Detailed Annotation

GNRA wlth tandem sheared

Broad Annotation

No text annotation

Motif group

HL_27115.2

Basepair signature

cWW-F-F-F-F-F-F

Number of instances in this motif group

22

Unit IDs

8G61|1|L5|U|2006
8G61|1|L5|G|2007
8G61|1|L5|U|2008
8G61|1|L5|A|2009
8G61|1|L5|A|2010
8G61|1|L5|C|2011
8G61|1|L5|A|2012
8G61|1|L5|A|2013

Current chains

Chain L5

28S rRNA

Nearby chains

Chain Lm

eL40