HL_8IP8_022
3D structure
- PDB id
- 8IP8 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Wheat 80S ribosome stalled on AUG-Stop boron dependently
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- ACGUGCAAAU
- Length
- 10 nucleotides
- Bulged bases
- 8IP8|1|RB|U|882, 8IP8|1|RB|A|886
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8IP8_022 not in the Motif Atlas
- Homologous match to HL_8P9A_132
- Geometric discrepancy: 0.0896
- The information below is about HL_8P9A_132
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_50204.1
- Basepair signature
- cWW-cWS-tSW-F-F
- Number of instances in this motif group
- 11
Unit IDs
8IP8|1|RB|A|879
8IP8|1|RB|C|880
8IP8|1|RB|G|881
8IP8|1|RB|U|882
8IP8|1|RB|G|883
8IP8|1|RB|C|884
8IP8|1|RB|A|885
8IP8|1|RB|A|886
8IP8|1|RB|A|887
8IP8|1|RB|U|888
Current chains
- Chain RB
- 60S ribosomal RNA
Nearby chains
- Chain DB
- 60S ribosomal protein uL3
- Chain MA
- 60S ribosomal protein uL22
- Chain UA
- 60S ribosomal protein eL37
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