HL_8IP8_050
3D structure
- PDB id
- 8IP8 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Wheat 80S ribosome stalled on AUG-Stop boron dependently
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- GUAACUAUGAC
- Length
- 11 nucleotides
- Bulged bases
- 8IP8|1|RB|A|2249
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8IP8_050 not in the Motif Atlas
- Homologous match to HL_8C3A_049
- Geometric discrepancy: 0.3458
- The information below is about HL_8C3A_049
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_84702.1
- Basepair signature
- cWW-F-F-tHW-F-F-F-F
- Number of instances in this motif group
- 4
Unit IDs
8IP8|1|RB|G|2246
8IP8|1|RB|U|2247
8IP8|1|RB|A|2248
8IP8|1|RB|A|2249
8IP8|1|RB|C|2250
8IP8|1|RB|U|2251
8IP8|1|RB|A|2252
8IP8|1|RB|U|2253
8IP8|1|RB|G|2254
8IP8|1|RB|A|2255
8IP8|1|RB|C|2256
Current chains
- Chain RB
- 60S ribosomal RNA
Nearby chains
- Chain aa
- Small subunit ribosomal RNA; SSU rRNA
- Chain al
- mRNA
- Chain bl
- eukaryotic release factor 1
- Chain cl
- Transfer RNA; tRNA
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