HL_8IP8_051
3D structure
- PDB id
- 8IP8 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Wheat 80S ribosome stalled on AUG-Stop boron dependently
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- UCUAAUUAG
- Length
- 9 nucleotides
- Bulged bases
- 8IP8|1|RB|U|2291
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8IP8_051 not in the Motif Atlas
- Homologous match to HL_8C3A_050
- Geometric discrepancy: 0.097
- The information below is about HL_8C3A_050
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_27115.2
- Basepair signature
- cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 22
Unit IDs
8IP8|1|RB|U|2285
8IP8|1|RB|C|2286
8IP8|1|RB|U|2287
8IP8|1|RB|A|2288
8IP8|1|RB|A|2289
8IP8|1|RB|U|2290
8IP8|1|RB|U|2291
8IP8|1|RB|A|2292
8IP8|1|RB|G|2293
Current chains
- Chain RB
- 60S ribosomal RNA
Nearby chains
- Chain GA
- 60S ribosomal protein uL14
- Chain aa
- Small subunit ribosomal RNA; SSU rRNA
- Chain bl
- eukaryotic release factor 1
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