HL_8JSG_017
3D structure
- PDB id
- 8JSG (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the 30S-IF3 complex from Escherichia coli
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.6 Å
Loop
- Sequence
- GAUUAGAUACC
- Length
- 11 nucleotides
- Bulged bases
- 8JSG|1|g|U|793
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8JSG_017 not in the Motif Atlas
- Homologous match to HL_5J7L_017
- Geometric discrepancy: 0.4206
- The information below is about HL_5J7L_017
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_75293.5
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 11
Unit IDs
8JSG|1|g|G|786
8JSG|1|g|A|787
8JSG|1|g|U|788
8JSG|1|g|U|789
8JSG|1|g|A|790
8JSG|1|g|G|791
8JSG|1|g|A|792
8JSG|1|g|U|793
8JSG|1|g|A|794
8JSG|1|g|C|795
8JSG|1|g|C|796
Current chains
- Chain g
- 16S ribosomal RNA
Nearby chains
- Chain 2
- Small ribosomal subunit protein bS21
- Chain A
- Translation initiation factor IF-3
- Chain q
- Small ribosomal subunit protein uS11
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