HL_8OIN_045
3D structure
- PDB id
- 8OIN (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 55S mammalian mitochondrial ribosome with mtRF1 and P-site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.6 Å
Loop
- Sequence
- GUUUACCAAAAAC
- Length
- 13 nucleotides
- Bulged bases
- 8OIN|1|B8|A|832, 8OIN|1|B8|C|833, 8OIN|1|B8|C|834, 8OIN|1|B8|A|838
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8OIN_045 not in the Motif Atlas
- Homologous match to HL_7A0S_045
- Geometric discrepancy: 0.19
- The information below is about HL_7A0S_045
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_50951.1
- Basepair signature
- cWW-F-F-tWH-F-F-F
- Number of instances in this motif group
- 5
Unit IDs
8OIN|1|B8|G|828
8OIN|1|B8|U|829
8OIN|1|B8|U|830
8OIN|1|B8|U|831
8OIN|1|B8|A|832
8OIN|1|B8|C|833
8OIN|1|B8|C|834
8OIN|1|B8|A|835
8OIN|1|B8|A|836
8OIN|1|B8|A|837
8OIN|1|B8|A|838
8OIN|1|B8|A|839
8OIN|1|B8|C|840
Current chains
- Chain B8
- 16S rRNA
Nearby chains
- Chain BJ
- Mitochondrial ribosomal protein L34
- Chain BL
- uL2m
- Chain Bu
- Mitochondrial ribosomal protein L45
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