HL_8OIR_045
3D structure
- PDB id
- 8OIR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 55S human mitochondrial ribosome with mtRF1 and P-site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- UUUACCAAAAA
- Length
- 11 nucleotides
- Bulged bases
- 8OIR|1|B8|A|830, 8OIR|1|B8|C|831, 8OIR|1|B8|C|832, 8OIR|1|B8|A|836
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8OIR_045 not in the Motif Atlas
- Homologous match to HL_7RQB_045
- Geometric discrepancy: 0.1156
- The information below is about HL_7RQB_045
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_43613.5
- Basepair signature
- cWW-tWH-tWH-F
- Number of instances in this motif group
- 6
Unit IDs
8OIR|1|B8|U|827
8OIR|1|B8|U|828
8OIR|1|B8|U|829
8OIR|1|B8|A|830
8OIR|1|B8|C|831
8OIR|1|B8|C|832
8OIR|1|B8|A|833
8OIR|1|B8|A|834
8OIR|1|B8|A|835
8OIR|1|B8|A|836
8OIR|1|B8|A|837
Current chains
- Chain B8
- 16S rRNA
Nearby chains
- Chain BA
- 39S ribosomal protein L22, mitochondrial
- Chain BJ
- 39S ribosomal protein L34, mitochondrial
- Chain BL
- 39S ribosomal protein L2, mitochondrial
- Chain Bu
- 39S ribosomal protein L45, mitochondrial
Coloring options: