HL_8OVE_024
3D structure
- PDB id
- 8OVE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CRYO-EM STRUCTURE OF TRYPANOSOMA BRUCEI PROCYCLIC FORM 80S RIBOSOME : TB11CS6H1 snoRNA mutant
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.6 Å
Loop
- Sequence
- GA(PSU)UAGAGACC
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: PSU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8OVE_024 not in the Motif Atlas
- Homologous match to HL_8C3A_213
- Geometric discrepancy: 0.2654
- The information below is about HL_8C3A_213
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_75293.3
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 13
Unit IDs
8OVE|1|AA|G|1274
8OVE|1|AA|A|1275
8OVE|1|AA|PSU|1276
8OVE|1|AA|U|1277
8OVE|1|AA|A|1278
8OVE|1|AA|G|1279
8OVE|1|AA|A|1280
8OVE|1|AA|G|1281
8OVE|1|AA|A|1282
8OVE|1|AA|C|1283
8OVE|1|AA|C|1284
Current chains
- Chain AA
- SSU rRNA
Nearby chains
- Chain AH
- 40S ribosomal protein S14
- Chain BB
- Large subunit ribosomal RNA; LSU rRNA
Coloring options: