HL_8OVE_037
3D structure
- PDB id
- 8OVE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CRYO-EM STRUCTURE OF TRYPANOSOMA BRUCEI PROCYCLIC FORM 80S RIBOSOME : TB11CS6H1 snoRNA mutant
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.6 Å
Loop
- Sequence
- GCUCAUCA(A2M)AC
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: A2M
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8OVE_037 not in the Motif Atlas
- Geometric match to HL_5J7L_029
- Geometric discrepancy: 0.2574
- The information below is about HL_5J7L_029
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_06226.4
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 4
Unit IDs
8OVE|1|AA|G|2088
8OVE|1|AA|C|2089
8OVE|1|AA|U|2090
8OVE|1|AA|C|2091
8OVE|1|AA|A|2092
8OVE|1|AA|U|2093
8OVE|1|AA|C|2094
8OVE|1|AA|A|2095
8OVE|1|AA|A2M|2096
8OVE|1|AA|A|2097
8OVE|1|AA|C|2098
Current chains
- Chain AA
- SSU rRNA
Nearby chains
- Chain A8
- Putative ribosomal protein S29
- Chain AK
- 40S ribosomal protein S16, putative
- Chain AO
- Ribosomal protein S19, putative
- Chain AQ
- Ribosomal protein S10
Coloring options: