HL_8OVE_096
3D structure
- PDB id
- 8OVE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CRYO-EM STRUCTURE OF TRYPANOSOMA BRUCEI PROCYCLIC FORM 80S RIBOSOME : TB11CS6H1 snoRNA mutant
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.6 Å
Loop
- Sequence
- CGCAGAAG
- Length
- 8 nucleotides
- Bulged bases
- 8OVE|1|BB|G|1352
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8OVE_096 not in the Motif Atlas
- Homologous match to HL_8C3A_063
- Geometric discrepancy: 0.1297
- The information below is about HL_8C3A_063
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_79150.1
- Basepair signature
- cWW-F-F-F-F-F
- Number of instances in this motif group
- 12
Unit IDs
8OVE|1|BB|C|1351
8OVE|1|BB|G|1352
8OVE|1|BB|C|1353
8OVE|1|BB|A|1354
8OVE|1|BB|G|1355
8OVE|1|BB|A|1356
8OVE|1|BB|A|1357
8OVE|1|BB|G|1358
Current chains
- Chain BB
- LSUb rRNA
Nearby chains
- Chain BG
- Large subunit ribosomal RNA; LSU rRNA
- Chain Bs
- Ubiquitin-60S ribosomal protein L40
- Chain By
- 60S ribosomal protein L9, putative
Coloring options: