HL_8OZ0_009
3D structure
- PDB id
- 8OZ0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of a human 48S translation initiation complex with eIF4F and eIF4A
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- CCUGAGAAACGG
- Length
- 12 nucleotides
- Bulged bases
- 8OZ0|1|W|C|450, 8OZ0|1|W|G|451
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8OZ0_009 not in the Motif Atlas
- Homologous match to HL_8C3A_201
- Geometric discrepancy: 0.1193
- The information below is about HL_8C3A_201
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_06226.2
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 5
Unit IDs
8OZ0|1|W|C|441
8OZ0|1|W|C|442
8OZ0|1|W|U|443
8OZ0|1|W|G|444
8OZ0|1|W|A|445
8OZ0|1|W|G|446
8OZ0|1|W|A|447
8OZ0|1|W|A|448
8OZ0|1|W|A|449
8OZ0|1|W|C|450
8OZ0|1|W|G|451
8OZ0|1|W|G|452
Current chains
- Chain W
- 18S rRNA
Nearby chains
- Chain S
- 40S ribosomal protein S6
- Chain Y
- 40S ribosomal protein S4, X isoform
- Chain d
- 40S ribosomal protein S8
Coloring options: