HL_8OZ0_020
3D structure
- PDB id
- 8OZ0 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of a human 48S translation initiation complex with eIF4F and eIF4A
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.5 Å
Loop
- Sequence
- AGGUGAAAUU
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8OZ0_020 not in the Motif Atlas
- Homologous match to HL_8C3A_211
- Geometric discrepancy: 0.1268
- The information below is about HL_8C3A_211
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_75293.3
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 13
Unit IDs
8OZ0|1|W|A|957
8OZ0|1|W|G|958
8OZ0|1|W|G|959
8OZ0|1|W|U|960
8OZ0|1|W|G|961
8OZ0|1|W|A|962
8OZ0|1|W|A|963
8OZ0|1|W|A|964
8OZ0|1|W|U|965
8OZ0|1|W|U|966
Current chains
- Chain W
- 18S rRNA
Nearby chains
- Chain D
- Eukaryotic translation initiation factor 2 subunit 1
- Chain T
- 40S ribosomal protein S14
- Chain z
- mRNA
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