HL_8P9A_097
3D structure
- PDB id
- 8P9A (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 80S yeast ribosome in complex with Methyllissoclimide
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.9 Å
Loop
- Sequence
- AGGUGAAAUU
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8P9A_097 not in the Motif Atlas
- Homologous match to HL_8C3A_211
- Geometric discrepancy: 0.1155
- The information below is about HL_8C3A_211
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_75293.3
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 13
Unit IDs
8P9A|1|A|A|900
8P9A|1|A|G|901
8P9A|1|A|G|902
8P9A|1|A|U|903
8P9A|1|A|G|904
8P9A|1|A|A|905
8P9A|1|A|A|906
8P9A|1|A|A|907
8P9A|1|A|U|908
8P9A|1|A|U|909
Current chains
- Chain A
- 16S ribosomal RNA
Nearby chains
- Chain P
- 40S ribosomal protein S14-B
- Chain b
- Small ribosomal subunit protein eS26B
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