HL_8QCQ_013

3D structure

PDB id

8QCQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

B. subtilis ApdA-stalled ribosomal complex

Experimental method

ELECTRON MICROSCOPY

Resolution

2.3 Å

Loop

Sequence

ACACGUGAAAU

Length

11 nucleotides

Bulged bases

8QCQ|1|A|G|433

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8QCQ_013 not in the Motif Atlas

Homologous match to HL_5J7L_145

Geometric discrepancy: 0.0922

The information below is about HL_5J7L_145

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_91503.7

Basepair signature

cWW-F-F-F-F-F-F-F

Number of instances in this motif group

3

Unit IDs

8QCQ|1|A|A|429
8QCQ|1|A|C|430
8QCQ|1|A|A|431
8QCQ|1|A|C|432
8QCQ|1|A|G|433
8QCQ|1|A|U|434
8QCQ|1|A|G|435
8QCQ|1|A|A|436
8QCQ|1|A|A|437
8QCQ|1|A|A|438
8QCQ|1|A|U|439

Current chains

Chain A

23S rRNA

Nearby chains

Chain X

50S ribosomal protein L28