HL_8R55_028

3D structure

PDB id

8R55 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacillus subtilis MutS2-collided disome complex (stalled 70S)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.57 Å

Loop

Sequence

GUUAAGUC

Length

8 nucleotides

Bulged bases

8R55|1|A|G|1104

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8R55_028 not in the Motif Atlas

Homologous match to HL_5J7L_024

Geometric discrepancy: 0.1272

The information below is about HL_5J7L_024

Detailed Annotation

T-loop related

Broad Annotation

T-loop

Motif group

HL_77436.5

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

23

Unit IDs

8R55|1|A|G|1099
8R55|1|A|U|1100
8R55|1|A|U|1101
8R55|1|A|A|1102
8R55|1|A|A|1103
8R55|1|A|G|1104
8R55|1|A|U|1105
8R55|1|A|C|1106

Current chains

Chain A

16S rRNA (1533-MER)

Nearby chains

Chain B

30S ribosomal protein S2