HL_8R55_051

3D structure

PDB id

8R55 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacillus subtilis MutS2-collided disome complex (stalled 70S)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.57 Å

Loop

Sequence

ACACGUGAAAU

Length

11 nucleotides

Bulged bases

8R55|1|X|G|433

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8R55_051 not in the Motif Atlas

Homologous match to HL_5J7L_145

Geometric discrepancy: 0.1559

The information below is about HL_5J7L_145

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_91503.7

Basepair signature

cWW-F-F-F-F-F-F-F

Number of instances in this motif group

3

Unit IDs

8R55|1|X|A|429
8R55|1|X|C|430
8R55|1|X|A|431
8R55|1|X|C|432
8R55|1|X|G|433
8R55|1|X|U|434
8R55|1|X|G|435
8R55|1|X|A|436
8R55|1|X|A|437
8R55|1|X|A|438
8R55|1|X|U|439

Current chains

Chain X

23S RNA (2887-MER)

Nearby chains

Chain v

Large ribosomal subunit protein bL28