HL_8R55_073

3D structure

PDB id

8R55 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacillus subtilis MutS2-collided disome complex (stalled 70S)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.57 Å

Loop

Sequence

CGAAAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8R55_073 not in the Motif Atlas

Homologous match to HL_5J7L_167

Geometric discrepancy: 0.1519

The information below is about HL_5J7L_167

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.8

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

352

Unit IDs

8R55|1|X|C|1402
8R55|1|X|G|1403
8R55|1|X|A|1404
8R55|1|X|A|1405
8R55|1|X|A|1406
8R55|1|X|G|1407

Current chains

Chain X

23S RNA (2887-MER)

Nearby chains

Chain 2

Large ribosomal subunit protein bL34

Chain v

Large ribosomal subunit protein bL28