HL_8R55_084

3D structure

PDB id

8R55 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Bacillus subtilis MutS2-collided disome complex (stalled 70S)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.57 Å

Loop

Sequence

UUUAGCAAAAA

Length

11 nucleotides

Bulged bases

8R55|1|X|A|1809, 8R55|1|X|G|1810, 8R55|1|X|C|1811, 8R55|1|X|A|1815

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8R55_084 not in the Motif Atlas

Homologous match to HL_7RQB_045

Geometric discrepancy: 0.1023

The information below is about HL_7RQB_045

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_43613.5

Basepair signature

cWW-tWH-tWH-F

Number of instances in this motif group

6

Unit IDs

8R55|1|X|U|1806
8R55|1|X|U|1807
8R55|1|X|U|1808
8R55|1|X|A|1809
8R55|1|X|G|1810
8R55|1|X|C|1811
8R55|1|X|A|1812
8R55|1|X|A|1813
8R55|1|X|A|1814
8R55|1|X|A|1815
8R55|1|X|A|1816

Current chains

Chain X

23S RNA (2887-MER)

Nearby chains

Chain 2

Large ribosomal subunit protein bL34

Chain Z

Large ribosomal subunit protein uL2