HL_8RXH_063

3D structure

PDB id

8RXH (explore in PDB, NAKB, or RNA 3D Hub)

Description

CRYO-EM STRUCTURE OF LEISHMANIA MAJOR 80S RIBOSOME WITH A/P/E-site tRNA AND mRNA : PARENTAL STRAIN

Experimental method

ELECTRON MICROSCOPY

Resolution

2.93 Å

Loop

Sequence

CGUUGG

Length

6 nucleotides

Bulged bases

8RXH|1|L2|G|1485

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_8RXH_063 not in the Motif Atlas

Geometric match to HL_4KJI_001

Geometric discrepancy: 0.3809

The information below is about HL_4KJI_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_97696.1

Basepair signature

cWW-F-F

Number of instances in this motif group

6

Unit IDs

8RXH|1|L2|C|1478
8RXH|1|L2|G|1479
8RXH|1|L2|U|1483
8RXH|1|L2|U|1484
8RXH|1|L2|G|1485
8RXH|1|L2|G|1486

Current chains

Chain L2

LSUb_rRNA_chain_2

Nearby chains

Chain LK

Putative 40S ribosomal protein L14

Chain Lg

Putative ribosomal protein l35a