HL_8RXH_091
3D structure
- PDB id
- 8RXH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- CRYO-EM STRUCTURE OF LEISHMANIA MAJOR 80S RIBOSOME WITH A/P/E-site tRNA AND mRNA : PARENTAL STRAIN
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.93 Å
Loop
- Sequence
- CCUGAGAAAUAG
- Length
- 12 nucleotides
- Bulged bases
- 8RXH|1|S1|A|446
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8RXH_091 not in the Motif Atlas
- Homologous match to HL_8C3A_201
- Geometric discrepancy: 0.0808
- The information below is about HL_8C3A_201
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_06226.2
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 5
Unit IDs
8RXH|1|S1|C|436
8RXH|1|S1|C|437
8RXH|1|S1|U|438
8RXH|1|S1|G|439
8RXH|1|S1|A|440
8RXH|1|S1|G|441
8RXH|1|S1|A|442
8RXH|1|S1|A|443
8RXH|1|S1|A|444
8RXH|1|S1|U|445
8RXH|1|S1|A|446
8RXH|1|S1|G|447
Current chains
- Chain S1
- SSU_rRNA_chain_S1
Nearby chains
- Chain SE
- 40S ribosomal protein S4
- Chain SG
- 40S ribosomal protein S6
- Chain SK
- 40S ribosomal protein S8
- Chain SZ
- 40S ribosomal protein S24
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