HL_8T5H_054
3D structure
- PDB id
- 8T5H (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM studies of the interplay between uS2 ribosomal protein and leaderless mRNA during bacterial translation initiation
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.3 Å
Loop
- Sequence
- GGUAAGUUC
- Length
- 9 nucleotides
- Bulged bases
- 8T5H|1|B|U|1955
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8T5H_054 not in the Motif Atlas
- Homologous match to HL_8VTW_048
- Geometric discrepancy: 0.0972
- The information below is about HL_8VTW_048
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_27115.2
- Basepair signature
- cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 22
Unit IDs
8T5H|1|B|G|1949
8T5H|1|B|G|1950
8T5H|1|B|U|1951
8T5H|1|B|A|1952
8T5H|1|B|A|1953
8T5H|1|B|G|1954
8T5H|1|B|U|1955
8T5H|1|B|U|1956
8T5H|1|B|C|1957
Current chains
- Chain B
- 23S
Nearby chains
- Chain K
- 50S ribosomal protein L14
- Chain v
- Small subunit ribosomal RNA; SSU rRNA
Coloring options: