HL_8V9K_049
3D structure
- PDB id
- 8V9K (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of the Mycobacterium smegmatis 70S ribosome in complex with hibernation factor Rv2629 (Balon) (Structure 5)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- UUUACUAAAAA
- Length
- 11 nucleotides
- Bulged bases
- 8V9K|1|A|A|1997, 8V9K|1|A|C|1998, 8V9K|1|A|U|1999, 8V9K|1|A|A|2003
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8V9K_049 not in the Motif Atlas
- Homologous match to HL_4WF9_043
- Geometric discrepancy: 0.1291
- The information below is about HL_4WF9_043
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_87681.1
- Basepair signature
- cWW-cWW-tWH-F-tWH-F-F-F-F-F
- Number of instances in this motif group
- 9
Unit IDs
8V9K|1|A|U|1994
8V9K|1|A|U|1995
8V9K|1|A|U|1996
8V9K|1|A|A|1997
8V9K|1|A|C|1998
8V9K|1|A|U|1999
8V9K|1|A|A|2000
8V9K|1|A|A|2001
8V9K|1|A|A|2002
8V9K|1|A|A|2003
8V9K|1|A|A|2004
Current chains
- Chain A
- 23S Ribosomal RNA
Nearby chains
- Chain 6
- 50S ribosomal protein L34
- Chain C
- 50S ribosomal protein L2
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