HL_8VFT_090
3D structure
- PDB id
- 8VFT (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Translating 80S rabbit ribosome stalled by emetine with eEF2
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.3 Å
Loop
- Sequence
- CCUGAGAAACGG
- Length
- 12 nucleotides
- Bulged bases
- 8VFT|1|9|C|450, 8VFT|1|9|G|451
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8VFT_090 not in the Motif Atlas
- Homologous match to HL_8C3A_201
- Geometric discrepancy: 0.1131
- The information below is about HL_8C3A_201
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_06226.2
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 5
Unit IDs
8VFT|1|9|C|441
8VFT|1|9|C|442
8VFT|1|9|U|443
8VFT|1|9|G|444
8VFT|1|9|A|445
8VFT|1|9|G|446
8VFT|1|9|A|447
8VFT|1|9|A|448
8VFT|1|9|A|449
8VFT|1|9|C|450
8VFT|1|9|G|451
8VFT|1|9|G|452
Current chains
- Chain 9
- 18S rRNA
Nearby chains
- Chain EE
- eS4
- Chain GG
- eS6
- Chain II
- eS8
- Chain YY
- eS24
Coloring options: