HL_8ZEJ_056
3D structure
- PDB id
- 8ZEJ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of E.coli ribosome in complex with an engineered arrest peptide
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.69 Å
Loop
- Sequence
- ACACGUGGUAU
- Length
- 11 nucleotides
- Bulged bases
- 8ZEJ|1|b|G|386
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_8ZEJ_056 not in the Motif Atlas
- Geometric match to HL_5J7L_145
- Geometric discrepancy: 0.1276
- The information below is about HL_5J7L_145
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_91503.7
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 3
Unit IDs
8ZEJ|1|b|A|382
8ZEJ|1|b|C|383
8ZEJ|1|b|A|384
8ZEJ|1|b|C|385
8ZEJ|1|b|G|386
8ZEJ|1|b|U|387
8ZEJ|1|b|G|388
8ZEJ|1|b|G|389
8ZEJ|1|b|U|390
8ZEJ|1|b|A|391
8ZEJ|1|b|U|392
Current chains
- Chain b
- 23S rRNA
Nearby chains
- Chain 0
- 50S ribosomal protein L28
- Chain X
- Transfer RNA; tRNA
Coloring options: