HL_9B11_058
3D structure
- PDB id
- 9B11 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- In situ human unrotated hibernating without CCDC124 state 80S ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.77 Å
Loop
- Sequence
- UCUAAUUAG
- Length
- 9 nucleotides
- Bulged bases
- 9B11|1|L5|U|3802
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9B11_058 not in the Motif Atlas
- Homologous match to HL_8CRE_048
- Geometric discrepancy: 0.0777
- The information below is about HL_8CRE_048
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_20167.2
- Basepair signature
- cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 10
Unit IDs
9B11|1|L5|U|3796
9B11|1|L5|C|3797
9B11|1|L5|U|3798
9B11|1|L5|A|3799
9B11|1|L5|A|3800
9B11|1|L5|U|3801
9B11|1|L5|U|3802
9B11|1|L5|A|3803
9B11|1|L5|G|3804
Current chains
- Chain L5
- 28S rRNA
Nearby chains
- Chain LV
- 60S ribosomal protein L23
- Chain S2
- Small subunit ribosomal RNA; SSU rRNA
Coloring options: