HL_9B24_040
3D structure
- PDB id
- 9B24 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- WT strain gidB mutant mycobacterial ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.47 Å
Loop
- Sequence
- UGAAUAUAUAG
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9B24_040 not in the Motif Atlas
- Homologous match to HL_5J7L_138
- Geometric discrepancy: 0.3366
- The information below is about HL_5J7L_138
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_68257.1
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 2
Unit IDs
9B24|1|Y|U|157
9B24|1|Y|G|158
9B24|1|Y|A|159
9B24|1|Y|A|160
9B24|1|Y|U|161
9B24|1|Y|A|162
9B24|1|Y|U|163
9B24|1|Y|A|164
9B24|1|Y|U|165
9B24|1|Y|A|166
9B24|1|Y|G|167
Current chains
- Chain Y
- 23S rRNA
Nearby chains
- Chain t
- Large ribosomal subunit protein bL28
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