HL_9B24_081
3D structure
- PDB id
- 9B24 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- WT strain gidB mutant mycobacterial ribosome
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.47 Å
Loop
- Sequence
- UUUACUAAAAA
- Length
- 11 nucleotides
- Bulged bases
- 9B24|1|Y|A|1997, 9B24|1|Y|C|1998, 9B24|1|Y|U|1999, 9B24|1|Y|A|2003
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9B24_081 not in the Motif Atlas
- Homologous match to HL_4WF9_043
- Geometric discrepancy: 0.1572
- The information below is about HL_4WF9_043
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_87681.1
- Basepair signature
- cWW-cWW-tWH-F-tWH-F-F-F-F-F
- Number of instances in this motif group
- 9
Unit IDs
9B24|1|Y|U|1994
9B24|1|Y|U|1995
9B24|1|Y|U|1996
9B24|1|Y|A|1997
9B24|1|Y|C|1998
9B24|1|Y|U|1999
9B24|1|Y|A|2000
9B24|1|Y|A|2001
9B24|1|Y|A|2002
9B24|1|Y|A|2003
9B24|1|Y|A|2004
Current chains
- Chain Y
- 23S rRNA
Nearby chains
- Chain Z
- Large ribosomal subunit protein uL2
- Chain z
- Large ribosomal subunit protein bL34
Coloring options: