HL_9BH5_093
3D structure
- PDB id
- 9BH5 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- High-resolution C. elegans 80S ribosome structure - class 1
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.63 Å
Loop
- Sequence
- GACUCAACAC
- Length
- 10 nucleotides
- Bulged bases
- 9BH5|1|B2|A|1155
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9BH5_093 not in the Motif Atlas
- Homologous match to HL_4V88_212
- Geometric discrepancy: 0.1004
- The information below is about HL_4V88_212
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_50779.1
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 5
Unit IDs
9BH5|1|B2|G|1147
9BH5|1|B2|A|1148
9BH5|1|B2|C|1149
9BH5|1|B2|U|1150
9BH5|1|B2|C|1151
9BH5|1|B2|A|1152
9BH5|1|B2|A|1153
9BH5|1|B2|C|1154
9BH5|1|B2|A|1155
9BH5|1|B2|C|1156
Current chains
- Chain B2
- 18S rRNA
Nearby chains
- Chain AP
- Small ribosomal subunit protein uS19
- Chain AQ
- Small ribosomal subunit protein uS9
- Chain AU
- Small ribosomal subunit protein uS10
- Chain Ad
- Small ribosomal subunit protein uS14
- Chain DA
- Transfer RNA; tRNA
- Chain DB
- Transfer RNA; tRNA
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