HL_9C3H_079
3D structure
- PDB id
- 9C3H (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the CNOT3-bound human 80S ribosome with tRNA-ARG in the P-site.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2 Å
Loop
- Sequence
- UCAGGG
- Length
- 6 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9C3H_079 not in the Motif Atlas
- Homologous match to HL_8C3A_200
- Geometric discrepancy: 0.1725
- The information below is about HL_8C3A_200
- Detailed Annotation
- GNRA variation
- Broad Annotation
- GNRA variation
- Motif group
- HL_02837.1
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 9
Unit IDs
9C3H|1|S2|U|416
9C3H|1|S2|C|417
9C3H|1|S2|A|418
9C3H|1|S2|G|419
9C3H|1|S2|G|420
9C3H|1|S2|G|421
Current chains
- Chain S2
- 18S rRNA
Nearby chains
- Chain SC
- Small ribosomal subunit protein uS5
- Chain SJ
- Small ribosomal subunit protein uS4
- Chain SL
- Small ribosomal subunit protein uS17
- Chain SW
- Small ribosomal subunit protein uS8
- Chain SX
- Small ribosomal subunit protein uS12
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