HL_9C3H_089
3D structure
- PDB id
- 9C3H (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the CNOT3-bound human 80S ribosome with tRNA-ARG in the P-site.
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2 Å
Loop
- Sequence
- AGGUGAAAU(PSU)
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: PSU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9C3H_089 not in the Motif Atlas
- Homologous match to HL_8C3A_211
- Geometric discrepancy: 0.0952
- The information below is about HL_8C3A_211
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_75293.3
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 13
Unit IDs
9C3H|1|S2|A|957
9C3H|1|S2|G|958
9C3H|1|S2|G|959
9C3H|1|S2|U|960
9C3H|1|S2|G|961
9C3H|1|S2|A|962
9C3H|1|S2|A|963
9C3H|1|S2|A|964
9C3H|1|S2|U|965
9C3H|1|S2|PSU|966
Current chains
- Chain S2
- 18S rRNA
Nearby chains
- Chain S1
- Small ribosomal subunit protein eS1
- Chain S5
- mRNA
- Chain SB
- CCR4-NOT transcription complex subunit 3
- Chain SD
- Small ribosomal subunit protein uS7
- Chain SO
- Small ribosomal subunit protein uS11
- Chain Sa
- Small ribosomal subunit protein eS26
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