HL_9E0P_047
3D structure
- PDB id
- 9E0P (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- M. smegmatis methylated 70S ribosome structure
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.17 Å
Loop
- Sequence
- GUAACUAUAA(OMC)
- Length
- 11 nucleotides
- Bulged bases
- 9E0P|1|A|A|2137
- QA status
- Modified nucleotides: OMC
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9E0P_047 not in the Motif Atlas
- Geometric match to HL_8CRE_047
- Geometric discrepancy: 0.2642
- The information below is about HL_8CRE_047
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_25847.2
- Basepair signature
- cWW-F-cSH-tHW-F-F-F
- Number of instances in this motif group
- 3
Unit IDs
9E0P|1|A|G|2134
9E0P|1|A|U|2135
9E0P|1|A|A|2136
9E0P|1|A|A|2137
9E0P|1|A|C|2138
9E0P|1|A|U|2139
9E0P|1|A|A|2140
9E0P|1|A|U|2141
9E0P|1|A|A|2142
9E0P|1|A|A|2143
9E0P|1|A|OMC|2144
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain a
- Small subunit ribosomal RNA; SSU rRNA
Coloring options: