HL_9G6J_045
3D structure
- PDB id
- 9G6J (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- The structure of the Candida albicans ribosome with tRNA-fMet, mRNA, and compounds (GEN and MFQ) with strong density for the P-site tRNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.15 Å
Loop
- Sequence
- GUAACUAUGAC
- Length
- 11 nucleotides
- Bulged bases
- 9G6J|1|1|A|2234
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9G6J_045 not in the Motif Atlas
- Homologous match to HL_8CRE_047
- Geometric discrepancy: 0.1943
- The information below is about HL_8CRE_047
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_25847.2
- Basepair signature
- cWW-F-cSH-tHW-F-F-F
- Number of instances in this motif group
- 3
Unit IDs
9G6J|1|1|G|2231
9G6J|1|1|U|2232
9G6J|1|1|A|2233
9G6J|1|1|A|2234
9G6J|1|1|C|2235
9G6J|1|1|U|2236
9G6J|1|1|A|2237
9G6J|1|1|U|2238
9G6J|1|1|G|2239
9G6J|1|1|A|2240
9G6J|1|1|C|2241
Current chains
- Chain 1
- 25S rRNA
Nearby chains
- Chain A
- Small subunit ribosomal RNA; SSU rRNA
- Chain AT
- Transfer RNA; tRNA
- Chain MR
- mRNA
- Chain PT
- Transfer RNA; tRNA
Coloring options: