HL_9GFT_017
3D structure
- PDB id
- 9GFT (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of the HrpA-bound E. coli disome, Class I
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- GAUUAGAUACC
- Length
- 11 nucleotides
- Bulged bases
- 9GFT|1|0|U|793
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9GFT_017 not in the Motif Atlas
- Homologous match to HL_5J7L_017
- Geometric discrepancy: 0.0987
- The information below is about HL_5J7L_017
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_75293.5
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 11
Unit IDs
9GFT|1|0|G|786
9GFT|1|0|A|787
9GFT|1|0|U|788
9GFT|1|0|U|789
9GFT|1|0|A|790
9GFT|1|0|G|791
9GFT|1|0|A|792
9GFT|1|0|U|793
9GFT|1|0|A|794
9GFT|1|0|C|795
9GFT|1|0|C|796
Current chains
- Chain 0
- 16S ribosomal RNA
Nearby chains
- Chain D
- Small ribosomal subunit protein uS11
- Chain M
- Transfer RNA; tRNA
- Chain N
- Large subunit ribosomal RNA; LSU rRNA
- Chain v
- Small ribosomal subunit protein bS21
- Chain w
- messenger RNA
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