HL_9GFT_157

3D structure

PDB id

9GFT (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of the HrpA-bound E. coli disome, Class I

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

ACACGUGGUAU

Length

11 nucleotides

Bulged bases

9GFT|1|N|G|386

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9GFT_157 not in the Motif Atlas

Homologous match to HL_5J7L_145

Geometric discrepancy: 0.1507

The information below is about HL_5J7L_145

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_91503.7

Basepair signature

cWW-F-F-F-F-F-F-F

Number of instances in this motif group

3

Unit IDs

9GFT|1|N|A|382
9GFT|1|N|C|383
9GFT|1|N|A|384
9GFT|1|N|C|385
9GFT|1|N|G|386
9GFT|1|N|U|387
9GFT|1|N|G|388
9GFT|1|N|G|389
9GFT|1|N|U|390
9GFT|1|N|A|391
9GFT|1|N|U|392

Current chains

Chain N

23S RNA

Nearby chains

Chain k

Large ribosomal subunit protein bL28