HL_9GHH_048
3D structure
- PDB id
- 9GHH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Staphylococcus aureus FusB bound to the large subunit of the S. aureus 70S ribosome (FusB-Sa70S:LSU)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- GUAAC(3TD)AUAAC
- Length
- 11 nucleotides
- Bulged bases
- 9GHH|1|A|A|1940
- QA status
- Modified nucleotides: 3TD
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9GHH_048 not in the Motif Atlas
- Homologous match to HL_9DFE_046
- Geometric discrepancy: 0.2495
- The information below is about HL_9DFE_046
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_82185.1
- Basepair signature
- cWW-F-F-tHW-F-F-F-F
- Number of instances in this motif group
- 4
Unit IDs
9GHH|1|A|G|1937
9GHH|1|A|U|1938
9GHH|1|A|A|1939
9GHH|1|A|A|1940
9GHH|1|A|C|1941
9GHH|1|A|3TD|1942
9GHH|1|A|A|1943
9GHH|1|A|U|1944
9GHH|1|A|A|1945
9GHH|1|A|A|1946
9GHH|1|A|C|1947
Current chains
- Chain A
- 23S rRNA
Nearby chains
- Chain C
- Far1
- Chain F
- Transfer RNA; tRNA
- Chain a
- Small subunit ribosomal RNA; SSU rRNA
Coloring options: