HL_9GHH_098
3D structure
- PDB id
- 9GHH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Staphylococcus aureus FusB bound to the large subunit of the S. aureus 70S ribosome (FusB-Sa70S:LSU)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.7 Å
Loop
- Sequence
- GAA(2MG)(5MC)AACGC
- Length
- 10 nucleotides
- Bulged bases
- 9GHH|1|a|G|980
- QA status
- Modified nucleotides: 2MG, 5MC
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9GHH_098 not in the Motif Atlas
- Homologous match to HL_4LFB_021
- Geometric discrepancy: 0.0955
- The information below is about HL_4LFB_021
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_97521.1
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 5
Unit IDs
9GHH|1|a|G|972
9GHH|1|a|A|973
9GHH|1|a|A|974
9GHH|1|a|2MG|975
9GHH|1|a|5MC|976
9GHH|1|a|A|977
9GHH|1|a|A|978
9GHH|1|a|C|979
9GHH|1|a|G|980
9GHH|1|a|C|981
Current chains
- Chain a
- 16S rRNA
Nearby chains
- Chain F
- Transfer RNA; tRNA
- Chain j
- 30S ribosomal protein S9
- Chain k
- Small ribosomal subunit protein uS10
- Chain n
- 30S ribosomal protein S13
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