HL_9H3P_006

3D structure

PDB id

9H3P (explore in PDB, NAKB, or RNA 3D Hub)

Description

50S subunit precursor C-CP_(L22)-

Experimental method

ELECTRON MICROSCOPY

Resolution

7.06 Å

Loop

Sequence

GAAACAUC

Length

8 nucleotides

Bulged bases

9H3P|1|A|A|196, 9H3P|1|A|A|199

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9H3P_006 not in the Motif Atlas

Homologous match to HL_9DFE_005

Geometric discrepancy: 0.3728

The information below is about HL_9DFE_005

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_30068.2

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

15

Unit IDs

9H3P|1|A|G|194
9H3P|1|A|A|195
9H3P|1|A|A|196
9H3P|1|A|A|197
9H3P|1|A|C|198
9H3P|1|A|A|199
9H3P|1|A|U|200
9H3P|1|A|C|201

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain X

Large ribosomal subunit protein bL28