HL_9H74_027
3D structure
- PDB id
- 9H74 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Late-stage 48S Initiation Complex with eIF3 (LS48S-eIF3 IC) guided by the trans-RNA
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- GAC(I2T)CAACAC
- Length
- 10 nucleotides
- Bulged bases
- 9H74|1|2|A|1249
- QA status
- Modified nucleotides: I2T
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9H74_027 not in the Motif Atlas
- Homologous match to HL_9PN5_101
- Geometric discrepancy: 0.127
- The information below is about HL_9PN5_101
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_97521.4
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 7
Unit IDs
9H74|1|2|G|1241
9H74|1|2|A|1242
9H74|1|2|C|1243
9H74|1|2|I2T|1244
9H74|1|2|C|1245
9H74|1|2|A|1246
9H74|1|2|A|1247
9H74|1|2|C|1248
9H74|1|2|A|1249
9H74|1|2|C|1250
Current chains
- Chain 2
- 18S ribosomal RNA
Nearby chains
- Chain 1
- Transfer RNA; tRNA
- Chain R
- 40S ribosomal protein uS19
- Chain S
- Ribosomal protein S16
- Chain W
- 40S ribosomal protein uS10
- Chain e
- 40S ribosomal protein S29
- Chain f
- Ribosomal protein S27a
- Chain j
- Eukaryotic translation initiation factor 1A, X-chromosomal
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