HL_9HA4_035

3D structure

PDB id

9HA4 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Pooled 50S subunit C-CP_(L22)- precursor states supplemented with Api137

Experimental method

ELECTRON MICROSCOPY

Resolution

4.26 Å

Loop

Sequence

AGAGAAU

Length

7 nucleotides

Bulged bases

9HA4|1|A|A|1632, 9HA4|1|A|A|1634

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9HA4_035 not in the Motif Atlas

Homologous match to HL_5J7L_174

Geometric discrepancy: 0.2693

The information below is about HL_5J7L_174

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.8

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

352

Unit IDs

9HA4|1|A|A|1630
9HA4|1|A|G|1631
9HA4|1|A|A|1632
9HA4|1|A|G|1633
9HA4|1|A|A|1634
9HA4|1|A|A|1635
9HA4|1|A|U|1636

Current chains

Chain A

23S ribosomal RNA

Nearby chains