HL_9HLZ_054

3D structure

PDB id

9HLZ (explore in PDB, NAKB, or RNA 3D Hub)

Description

Translational activators Aep1, Aep2 and Atp25 in complex with mRNA and the yeast mitochondrial ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

UAUA

Length

4 nucleotides

Bulged bases

9HLZ|1|r|A|348

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_9HLZ_054 not in the Motif Atlas

Geometric match to HL_9E6Q_029

Geometric discrepancy: 0.0811

The information below is about HL_9E6Q_029

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_32346.6

Basepair signature

cWW-F

Number of instances in this motif group

11

Unit IDs

9HLZ|1|r|U|347
9HLZ|1|r|A|348
9HLZ|1|r|U|349
9HLZ|1|r|A|350

Current chains

Chain r

15S mitochondrial rRNA

Nearby chains

Chain 2

Small ribosomal subunit protein mS41

Chain II

Large ribosomal subunit protein uL14m

Chain MM

Large ribosomal subunit protein bL19m