HL_9RHU_109
3D structure
- PDB id
- 9RHU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Rabbit 80S ribosome in complex with eRF1-AAQ, stalled at the Stop codon in mutated F2A sequence
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.65 Å
Loop
- Sequence
- CAGCUAGC(PSU)G
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: PSU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
9RHU|1|C3|C|47
9RHU|1|C3|A|48
9RHU|1|C3|G|49
9RHU|1|C3|C|50
9RHU|1|C3|U|51
9RHU|1|C3|A|52
9RHU|1|C3|G|53
9RHU|1|C3|C|54
9RHU|1|C3|PSU|55
9RHU|1|C3|G|56
Current chains
- Chain C3
- 5.8S rRNA
Nearby chains
- Chain A3
- Large subunit ribosomal RNA; LSU rRNA
- Chain T2
- Large ribosomal subunit protein uL23
- Chain d2
- 60S ribosomal protein L35
- Chain f2
- Ribosomal protein L37
- Chain h2
- 60S ribosomal protein L39-like
Coloring options: