HL_9SYR_066

3D structure

PDB id

9SYR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human quaternary complex of a translating 80S ribosome, NAC, MetAP1 and NatD

Experimental method

ELECTRON MICROSCOPY

Resolution

3.55 Å

Loop

Sequence

CAGCUAGC(PSU)G

Length

10 nucleotides

Bulged bases

None detected

QA status

Modified nucleotides: PSU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9SYR|1|L3|C|47
9SYR|1|L3|A|48
9SYR|1|L3|G|49
9SYR|1|L3|C|50
9SYR|1|L3|U|51
9SYR|1|L3|A|52
9SYR|1|L3|G|53
9SYR|1|L3|C|54
9SYR|1|L3|PSU|55
9SYR|1|L3|G|56

Current chains

Chain L3

5.8S rRNA

Nearby chains

Chain L1

Large subunit ribosomal RNA; LSU rRNA

Chain LA

Large ribosomal subunit protein eL37

Chain LC

60S ribosomal protein L39

Chain Lo

60S ribosomal protein L23a

Chain Ly

60S ribosomal protein L35