HL_9SYR_087

3D structure

PDB id

9SYR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Human quaternary complex of a translating 80S ribosome, NAC, MetAP1 and NatD

Experimental method

ELECTRON MICROSCOPY

Resolution

3.55 Å

Loop

Sequence

GA(PSU)CAGAUACC

Length

11 nucleotides

Bulged bases

9SYR|1|S1|U|1061

QA status

Modified nucleotides: PSU

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

9SYR|1|S1|G|1054
9SYR|1|S1|A|1055
9SYR|1|S1|PSU|1056
9SYR|1|S1|C|1057
9SYR|1|S1|A|1058
9SYR|1|S1|G|1059
9SYR|1|S1|A|1060
9SYR|1|S1|U|1061
9SYR|1|S1|A|1062
9SYR|1|S1|C|1063
9SYR|1|S1|C|1064

Current chains

Chain S1

18S rRNA

Nearby chains

Chain L1

Large subunit ribosomal RNA; LSU rRNA

Chain S2

mRNA

Chain S3

Transfer RNA; tRNA

Chain SG

40S ribosomal protein S14

Chain Sj

40S ribosomal protein S26