HL_9UZM_020
3D structure
- PDB id
- 9UZM (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- 40S ribosome without initiation factors
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 4.5 Å
Loop
- Sequence
- GAUCAGAUACC
- Length
- 11 nucleotides
- Bulged bases
- 9UZM|1|2|U|1057
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9UZM_020 not in the Motif Atlas
- Homologous match to HL_9H3G_095
- Geometric discrepancy: 0.3622
- The information below is about HL_9H3G_095
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_38491.5
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 16
Unit IDs
9UZM|1|2|G|1050
9UZM|1|2|A|1051
9UZM|1|2|U|1052
9UZM|1|2|C|1053
9UZM|1|2|A|1054
9UZM|1|2|G|1055
9UZM|1|2|A|1056
9UZM|1|2|U|1057
9UZM|1|2|A|1058
9UZM|1|2|C|1059
9UZM|1|2|C|1060
Current chains
- Chain 2
- 18S ribosomal RNA
Nearby chains
- Chain Q
- Ribosomal protein S14
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