HL_9WNQ_091
3D structure
- PDB id
- 9WNQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of E.coli ribosome in complex with an engineered arrest peptide
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.59 Å
Loop
- Sequence
- GUAACUAUAAC
- Length
- 11 nucleotides
- Bulged bases
- 9WNQ|1|b|A|1913
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_9WNQ_091 not in the Motif Atlas
- Geometric match to HL_8OI5_044
- Geometric discrepancy: 0.1435
- The information below is about HL_8OI5_044
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_82185.1
- Basepair signature
- cWW-F-F-tHW-F-F-F-F
- Number of instances in this motif group
- 4
Unit IDs
9WNQ|1|b|G|1910
9WNQ|1|b|U|1911
9WNQ|1|b|A|1912
9WNQ|1|b|A|1913
9WNQ|1|b|C|1914
9WNQ|1|b|U|1915
9WNQ|1|b|A|1916
9WNQ|1|b|U|1917
9WNQ|1|b|A|1918
9WNQ|1|b|A|1919
9WNQ|1|b|C|1920
Current chains
- Chain b
- 23S ribosomal RNA
Nearby chains
- Chain A
- Small subunit ribosomal RNA; SSU rRNA
- Chain Y
- Transfer RNA; tRNA
- Chain Z
- Transfer RNA; tRNA
Coloring options: